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Y-Chromosome STR System, Y-PLEX (TM) 12, for Forensic Casework: Development and Validation

NCJ Number
207713
Journal
Journal of Forensic Sciences Volume: 49 Issue: 6 Dated: November 2004 Pages: 1278-1290
Author(s)
Jaiprakash G. Shewale Ph.D.; Huma Nasir B.S.; Elaine Schneida B.S.; Ann Marie Gross M.S.; Bruce Budowle Ph.D.; Suhir K. Sinha Ph.D.
Date Published
November 2004
Length
13 pages
Annotation
This paper presents the methodology and findings of validation studies for the Y-PLEXtm 12 system, which was developed to perform the simultaneous amplification of 11 polymorphic short tandem repeat (STR) loci that reside on the Y chromosome and Amelogenin.
Abstract
The validation studies were performed according to the DNA Advisory Board's Quality Assurance Standards. The authors' descriptions of materials and methods addresses the extraction and quantitation of DNA, amplification, analysis of the amplified products, and contamination and environmental insult analysis. The presentation and discussion of the validation findings focuses on the development of the multiplex system, the generation of the allelic ladder, the precision of allele sizing and reproducibility, minimum sensitivity, stutter studies, internal control for PCR, the male-female mixture study, the two-male mixture study, female DNA, nonhuman studies, interlaboratory concordance study, contamination and environmental insult analysis, and nonprobative samples. The validation studies concluded that the Y-PLEXtm 12 system does reliably perform simultaneous amplification and analysis for the 11 Y-STR loci recommended by the SWGDAM, as well as the Amelogenin locus. Amelogenin provides results for gender identification and serves as an internal control for PCR. Amelogenin did not adversely affect the amplification of the Y-STR's. The system's sensitivity was sufficient to obtain a complete profile from as little as 0.1 ng of male DNA. 7 figures, 6 tables, and 35 references